PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HB-other | ||||||||
Protein Properties | Length: 253aa MW: 28083.2 Da PI: 8.2461 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.5 | 2.6e-09 | 2 | 29 | 30 | 57 |
HHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 30 reeLAkklgLterqVkvWFqNrRakekk 57 + +LA++l+L+e+q++ WF+ rR k+k+ PCP041465.1 2 KSQLAEQLRLSEKQISGWFCHRRLKDKR 29 579***********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKSQLAEQLR LSEKQISGWF CHRRLKDKRL LRDETQANGR QDRSSVVIQD RASGLGQDSC 60 GSTKHGEHRF VDPREVESRR LSGHDFTAAD ITREYRSHYT ERIGDMDNTS SESSSSLQDR 120 LLTRKEDPYD AETSRYRTHA KGMENMGYKP SGFLKVKGEA ENAAITAVKR QLGRQYWEDG 180 PLLGVEFDLL PPGAFESPII GSSHEPSTIG NTVLRSPDIS GVKGQLSPST VSGPNAFSLH 240 FDRSGVGKGV TTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 4e-55 | HB-other family protein |