PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 37129.8 Da PI: 9.569 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.5e-18 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll++ v+++G g+W+++ar g++R +k+c++rw +yl PCP041379.1 24 KGPWTAEEDGLLIEHVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 71 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.4e-16 | 77 | 121 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++d+++++G++ W+tIar ++ gRt++++k++w+++ PCP041379.1 77 RGHITPHEESIILDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 121 6778******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MYLGMMAGGH HRGWGMIEDE AWRKGPWTAE EDGLLIEHVR LHGEGRWNSV ARLAGLKRNG 60 KSCRLRWVNY LRPELKRGHI TPHEESIILD LHARWGNRWS TIARSLPGRT DNEIKNYWRT 120 HFKKKAKAPS DASERAKTRL LRRHKPHNQQ QQQQNLQVDQ ELKRIMSLLD ENETKLPLYW 180 PHAADHHQEQ GFFYSMLDGN IVNVSMPEAA SSNEVNFLWD GIVWYANGTG QDRTERNGAG 240 AKMPLDGNKE EEEGDGEVII LCSTDVERVV PGGEVERKFT QNSSRGTARS TRFRRTKRET 300 ERLVSLCSVP SHVPNGTLFI VNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-77 | MYB family protein |