PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 115aa MW: 12736.4 Da PI: 6.7835 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 51.4 | 2.1e-16 | 1 | 99 | 6 | 109 |
GRAS 6 lecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 +e+A+a+s+g+ e+a ++L+r++ + a+p+ ++ qRl ++ AL++r++ + + p e +e++ +++ ++e+sP++++++++aN a PCP041305.1 1 MEAATAISDGKSEAAMEILTRMNSTqvANPRPSSEQRLLEFMGLALKSRVNP----IDNPAPIAELF---RQEHTGSTQSLYELSPCFRLGFMAANLA 91 689*******************9988799999*******************9....66655665555...8999999********************* PP GRAS 102 Ileavege 109 Ilea+ ++ PCP041305.1 92 ILEATMTD 99 ****9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
MEAATAISDG KSEAAMEILT RMNSTQVANP RPSSEQRLLE FMGLALKSRV NPIDNPAPIA 60 ELFRQEHTGS TQSLYELSPC FRLGFMAANL AILEATMTDQ SATSKARCRE DHHRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52510.1 | 5e-26 | GRAS family protein |