PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | CPP | ||||||||
Protein Properties | Length: 788aa MW: 86189.7 Da PI: 5.3491 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 49.7 | 7.2e-16 | 491 | 529 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk PCP041149.1 491 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 529 689**********************************96 PP | |||||||
2 | TCR | 50.5 | 4e-16 | 576 | 614 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN PCP041149.1 576 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 614 589***********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 788 aa Download sequence |
MDTPERNQIG TPKAKFEDSP VFNYISSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SSHKESRFLR RHNPSDLSKP ESSLESGNKV SVNEDAAELY INAEELHENC VPGDPVGETS 120 AEPPCEHSKF VIELPRNLKY DCGSPECDAT TSCGTEAGCE LEAAGLSAPL VPYAQKTSEN 180 GSSDGEGEAH LQNICQSGQR REGTGCDWES LISDATDLLI FDSPNASEAF RGIMQNPLDS 240 VTRFCNSLMP RLSQNDINDE QNVLVLDTVG SGEQPETEDP SSQYGEASQQ EDTELMQDHL 300 NSCMVSNQIE KEDQFNCKPG LNLHRGLRRR CLDFEMAEAR RKSLDNVPNS SSLLSQSDEK 360 ITTNDKQLVP MKPGGESARC ILPGIGLHLN ALATTSKDYK TIKRENMAYG RQLSLPNLSA 420 SAHSPTAGQG PGHESFSSAS SERDMDGTEN GVQLLQDASQ EPAFLANEEF NQNSPKKKRR 480 KFEQAGETES SCKRCNCKKS KCLKLYCECF AAGVYCIEPC SCQECFNKPI HEDTVLATRK 540 QIESRNPLAF APKVIRTADP VPEYGEESSK TPASARHKRG CNCKKSSCLK KYCECYQGGV 600 GCSISCRCEG CKNAFGRKDG SFVGTETEAD EEETEACDKS VAENHQQKNE IQKNEEQRQD 660 SALPSTPLRL SRQFSLPFSS KNKPPRSSTF NIGSSSGLYT ITIQKLGKPN ILRPESNLEG 720 HNQAVPEDEM PEILQGDGSP STGIKTASPN GKRVSPPNNE FGPSPGRRAG RKLILQSIPS 780 FPSLTPQH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 475 | 481 | PKKKRRK |
2 | 476 | 480 | KKKRR |
3 | 476 | 481 | KKKRRK |
4 | 477 | 481 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-158 | CPP family protein |