PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041146.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 690aa MW: 79418 Da PI: 6.2409

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041146.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.1	3.1e-23	70	161	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+ +++++ HnHel PCP041146.1 70 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgASQWYASQFSNVHNHELL 161 69******************8888.**************************************99877789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MAMKPSNIWL RRQQCPCGDW KCYIKYEGDD LTSVSSQHVK SEIAQSSSSS EAVFTPYVGQ 60 IFKTDDDAFE YYSNFARKNG FSIRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVEHP 120 RERKSVRCGC DAKLYLTKEI VDGASQWYAS QFSNVHNHEL LEDDQVRLLP AYRKIQEADQ 180 ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRTCKKTVQ ENDALLNEKR 240 ENDMLELLEA CKAMTERDPD FVYDYSVDEN EKVENITWSF GDSIRAYNVF GDVVALDTAY 300 RSVTYGLLLG VWFGIDNHGK AIFLGCVLLQ DESSHAFAWA LQAFMRFMRG RHPQTILTDI 360 DSGLTDAIAS KLPNSKHVIC IWHILSKISS WFSLPIGSQY ENFKAEFDML SHLENVEDFE 420 HQWNILVARF GLVSDKHVDL LYSYRASWAS SYIRSSFLAR TLTAEFSSSL ESFLKRILNG 480 QTCLQVFFEQ VSIAANFENQ TREGMQYMHV KTGMPLEEHA RNILTPYAFN VLQREIVLSE 540 QYAATDLGNG SYLLRHYKKL DGECLVIWMD DEQIHCSCKE FEHSGILCRH SLRVLVMKNY 600 FQLPEKYFLL RWRLESSLVS LDDQNAQISS DECARAFHGL TDTLLTESLI SKDRFNYVHS 660 ELTSLLEHVR KMPVIDEYAA IAAATNISES

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MAMKPSNIWL RRQQCPCGDW KCYIKYEGDD LTSVSSQHVK SEIAQSSSSS EAVFTPYVGQ  60
IFKTDDDAFE YYSNFARKNG FSIRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVEHP  120
RERKSVRCGC DAKLYLTKEI VDGASQWYAS QFSNVHNHEL LEDDQVRLLP AYRKIQEADQ  180
ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRTCKKTVQ ENDALLNEKR  240
ENDMLELLEA CKAMTERDPD FVYDYSVDEN EKVENITWSF GDSIRAYNVF GDVVALDTAY  300
RSVTYGLLLG VWFGIDNHGK AIFLGCVLLQ DESSHAFAWA LQAFMRFMRG RHPQTILTDI  360
DSGLTDAIAS KLPNSKHVIC IWHILSKISS WFSLPIGSQY ENFKAEFDML SHLENVEDFE  420
HQWNILVARF GLVSDKHVDL LYSYRASWAS SYIRSSFLAR TLTAEFSSSL ESFLKRILNG  480
QTCLQVFFEQ VSIAANFENQ TREGMQYMHV KTGMPLEEHA RNILTPYAFN VLQREIVLSE  540
QYAATDLGNG SYLLRHYKKL DGECLVIWMD DEQIHCSCKE FEHSGILCRH SLRVLVMKNY  600
FQLPEKYFLL RWRLESSLVS LDDQNAQISS DECARAFHGL TDTLLTESLI SKDRFNYVHS  660
ELTSLLEHVR KMPVIDEYAA IAAATNISES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein