PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 342aa MW: 38661.8 Da PI: 8.6707 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 4e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ + + +G+g +W + +++ g++R++k+c++rw++yl PCP041037.1 14 RGPWSPEEDAALKSYLESHGTGgNWILLPKKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 24 | 8.8e-08 | 69 | 117 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 g++T+eEd ++ + +q+G+++ ++ +R++k+c++rw++yl PCP041037.1 69 GSFTEEEDSIIFSLYNQMGSRQVNKXXXXXXxxXRRCGKSCRLRWLNYL 117 78*******************8888666666999*************97 PP | |||||||
3 | Myb_DNA-binding | 47.2 | 5.1e-15 | 124 | 173 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqk 46 g++T+eEd ++ + +q+G++ W+ Ia++m+ gRt++++k++w++ PCP041037.1 124 GSFTEEEDSIIFSLYNQMGSRqvnkfkXWSVIASHMP-GRTDNDVKNYWNT 173 79***********************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MGRTPCCDKD NVKRGPWSPE EDAALKSYLE SHGTGGNWIL LPKKAGLRRC GKSCRLRWLN 60 YLRPDIKHGS FTEEEDSIIF SLYNQMGSRQ VNKXXXXXXX XXRRCGKSCR LRWLNYLRPD 120 IKHGSFTEEE DSIIFSLYNQ MGSRQVNKFK XWSVIASHMP GRTDNDVKNY WNTKLKKKLL 180 VLGGKVKNIS SEEREPTITN NANFSGIPKT EEPQDPAFST FQPATLQTLS DVNSGLNAYN 240 QTLRLNPDQL YSPKPLGFSN FGASSRRNFS TTVSLSQEGS SVSDSSSIAG NGYLDQDSWF 300 CMDYGYGMAY DNNVNYYGMC FEKKTSEAVP SGYTDLGELF SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 2e-49 | MYB family protein |