PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP040491.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 968aa MW: 106911 Da PI: 5.1178

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP040491.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l PCP040491.1 37 KGQWTPEEDEILRRAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	64.5	2.1e-20	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++vk++G++ W+tIa++++ gR +kqc++rw+++l PCP040491.1 89 KGPWSKEEDEVIIELVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	50.2	6e-16	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++++G++ W+ + ++ gRt++++k++w+ PCP040491.1 141 KEAWTQEEELALIRAHQMYGNK-WAELTKFLP-GRTDNSIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 968 aa Download sequence
MEGERTNSTP AEGLGDSIQK VRALHGRTSG PTRRSTKGQW TPEEDEILRR AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVKKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPGIN KEAWTQEEEL ALIRAHQMYG NKWAELTKFL PGRTDNSIKN 180 HWNSSVKKKL DSYLKSGLLT QFQGMPHVGN QNQHMMSSSS RMQSSGDDSG AKGAEVEEIS 240 ECSQDSTVAG CYLSAPEMAN VVPHTREEFG NNDVSRLVND PSCSPASCSE PYYPSMTIGD 300 ANFSIPEIPP ELVCSKFLEQ NFSHDAGASM SGDFQLNLHE LPNISSLECD QESSRMYTHC 360 MRSNESHEGV EGMGNMAFGS VKSEHMLISD DECCRALFSM NGGCFPSRDF TNCSNIVDLG 420 ACTDSVLLQP TNLQISETGR TSASQSYHPL DSGVIGTSCS QVVSAHENPL IYAGEPTHLF 480 RVQDQEFVTS LNDGFIYNNE SASSPCKSDL VNDSLKLVPV NTFASGLDAQ TCPVDVSSNE 540 QTEQQDAGEQ QDAGALCYEP PRFPSLDIPF FSCDLIQSCN DMQQEYSPLG IRQLMMSSMN 600 CLTPYRLWDS PSREGSPDAL LKSAAKTFTG TPSILKKRHR DLLSPLSPLS DRRIDKRLGT 660 DVTSCLARDF SRLDVMFEDT EKKEDSLSPS SDQKRNSDAS GENKENKGTC ENKVEKGIDG 720 TAMSDDGTVQ RDFDDDQSRE KGKQFQQTAD VDAKSKVDVV PTTQSAQPSG VLVERNTNDL 780 LLNSPDVVGC KAEKPFSSTA RTPKDQLRKS FEATNPGVPS KSFSARQCSS VKTPTICVKK 840 HGILADKCVQ SDSTSAPRET DSARNDVNIE SVFGGTPFKR SIDSPSAWKS PWFINSFVPG 900 PRVDTEITIE DIGFFMSPGD RSYDAIGLMK QISEQTAAAY ANAQEVLGNE TPESLLPGKT 960 ERPRYCGP

Sequence ? help Back to Top

Protein Sequence Length: 968 aa Download sequence

MEGERTNSTP AEGLGDSIQK VRALHGRTSG PTRRSTKGQW TPEEDEILRR AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVKKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPGIN KEAWTQEEEL ALIRAHQMYG NKWAELTKFL PGRTDNSIKN  180
HWNSSVKKKL DSYLKSGLLT QFQGMPHVGN QNQHMMSSSS RMQSSGDDSG AKGAEVEEIS  240
ECSQDSTVAG CYLSAPEMAN VVPHTREEFG NNDVSRLVND PSCSPASCSE PYYPSMTIGD  300
ANFSIPEIPP ELVCSKFLEQ NFSHDAGASM SGDFQLNLHE LPNISSLECD QESSRMYTHC  360
MRSNESHEGV EGMGNMAFGS VKSEHMLISD DECCRALFSM NGGCFPSRDF TNCSNIVDLG  420
ACTDSVLLQP TNLQISETGR TSASQSYHPL DSGVIGTSCS QVVSAHENPL IYAGEPTHLF  480
RVQDQEFVTS LNDGFIYNNE SASSPCKSDL VNDSLKLVPV NTFASGLDAQ TCPVDVSSNE  540
QTEQQDAGEQ QDAGALCYEP PRFPSLDIPF FSCDLIQSCN DMQQEYSPLG IRQLMMSSMN  600
CLTPYRLWDS PSREGSPDAL LKSAAKTFTG TPSILKKRHR DLLSPLSPLS DRRIDKRLGT  660
DVTSCLARDF SRLDVMFEDT EKKEDSLSPS SDQKRNSDAS GENKENKGTC ENKVEKGIDG  720
TAMSDDGTVQ RDFDDDQSRE KGKQFQQTAD VDAKSKVDVV PTTQSAQPSG VLVERNTNDL  780
LLNSPDVVGC KAEKPFSSTA RTPKDQLRKS FEATNPGVPS KSFSARQCSS VKTPTICVKK  840
HGILADKCVQ SDSTSAPRET DSARNDVNIE SVFGGTPFKR SIDSPSAWKS PWFINSFVPG  900
PRVDTEITIE DIGFFMSPGD RSYDAIGLMK QISEQTAAAY ANAQEVLGNE TPESLLPGKT  960
ERPRYCGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein