PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP040269.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 570aa MW: 63358.7 Da PI: 6.8651

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP040269.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57	6.2e-18	62	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GFs ++ +s++sk + +++ r+fvC +eg ++++ ++ C a+l++++++++kw++tk+++eH+H+la PCP040269.1 62 FYDEYARRLGFSSKVGQSSRSKPDATTIAREFVCGREGLKRRQADS--------------CGAMLRIELKRQDKWVLTKFVKEHSHALA 136 9************************************9998877..............*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MDVEVIDVEG MVHHGIADDG DAERSEGGEV NNTENSEAHG EDGISEPYVG MEFTSEEAAK 60 TFYDEYARRL GFSSKVGQSS RSKPDATTIA REFVCGREGL KRRQADSCGA MLRIELKRQD 120 KWVLTKFVKE HSHALASPGK MQYLRPRRHF AGAAKNAAET YQGVGIVPSG VMYLSMDGNH 180 GNRATVEKKR VVRNTSSAES NRPVKNAEEL VETFVYTANR IEGDGAISTF RVAKFEDDNK 240 AYIVTFNYPE LRAXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKNGTN 300 PDERSGELHG QESLTLRYNN LCREAIKYAE DGATTTETFI AAMTALKEGG KKVSVVKNNV 360 AKVAPPSGQI SVTGYDDKKN STSTSDLTPS LWPRHDEVMR RFNLNDAGAP AQNVSDLNLP 420 RMAPVSLHRD DGTPENMVVL PCLKSMTWVM ESKNSVPGNR VAVINLKLQD YSRIPSTESE 480 VKFQLSRVSL EPMLRSMSYI SDQLSTPANK VAVINLKLQD TETTSGESEV KFQVSRDTLG 540 AMLRSMAYIR EQLSSAAEIQ PESVAKKQRK

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MDVEVIDVEG MVHHGIADDG DAERSEGGEV NNTENSEAHG EDGISEPYVG MEFTSEEAAK  60
TFYDEYARRL GFSSKVGQSS RSKPDATTIA REFVCGREGL KRRQADSCGA MLRIELKRQD  120
KWVLTKFVKE HSHALASPGK MQYLRPRRHF AGAAKNAAET YQGVGIVPSG VMYLSMDGNH  180
GNRATVEKKR VVRNTSSAES NRPVKNAEEL VETFVYTANR IEGDGAISTF RVAKFEDDNK  240
AYIVTFNYPE LRAXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKNGTN  300
PDERSGELHG QESLTLRYNN LCREAIKYAE DGATTTETFI AAMTALKEGG KKVSVVKNNV  360
AKVAPPSGQI SVTGYDDKKN STSTSDLTPS LWPRHDEVMR RFNLNDAGAP AQNVSDLNLP  420
RMAPVSLHRD DGTPENMVVL PCLKSMTWVM ESKNSVPGNR VAVINLKLQD YSRIPSTESE  480
VKFQLSRVSL EPMLRSMSYI SDQLSTPANK VAVINLKLQD TETTSGESEV KFQVSRDTLG  540
AMLRSMAYIR EQLSSAAEIQ PESVAKKQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-135	FAR1 family protein