PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP040238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WRKY | ||||||||
Protein Properties | Length: 233aa MW: 25964.4 Da PI: 6.9258 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79 | 5.1e-25 | 178 | 218 | 2 | 42 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers PCP040238.1 178 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSF 218 8**************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNVKKDVVKR EDNINSNDMN GGGGGGGLTT SPFAGMFDFC EGEKSSSLGF MELLGVGVGQ 60 DYCPTSLFDY LPQTPSTVLP SLASTMGGKD QLSTDYSSLN QQPTTPNSSS ISSESSEAVN 120 EEHTDHKAAT DQEKNNEEEE HDEQQKTKKE LKAKKASRKR QREPRFAFMT KSEVDHLEDG 180 YRWRKYGQKA VKNSPFPRSY YRCTSASCNV KKRVERSFXX XXXXXXXQSI SAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 3e-38 | WRKY family protein |