PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP040057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 110aa MW: 12578.6 Da PI: 10.9424 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.2 | 1.9e-13 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll+++++ +G g+ ++ ++ g+ R++k+ck+rw +yl PCP040057.1 16 RGSWTAREDNLLIQYINSHGEGRRSSLPKNDGLLRCGKSCKLRWMNYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 25.2 | 3.7e-08 | 77 | 110 | 10 | 45 |
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 el++ ++++lG++ W++I + + gR ++++k++w+ PCP040057.1 77 ELILGLHALLGNR-WSLITGRPP-GRIDNEIKNYWN 110 677889*******.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MLNMGRAPCS KVGLHRGSWT AREDNLLIQY INSHGEGRRS SLPKNDGLLR CGKSCKLRWM 60 NYLRPDIKRG NITPVKELIL GLHALLGNRW SLITGRPPGR IDNEIKNYWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-47 | MYB family protein |