PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039849.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 287aa    MW: 33387.6 Da    PI: 6.6335
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039849.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.31.2e-2357141190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +fYn Y+ke GF +r+s+s  +++++e +++++ Cs  g++++++ +     ++r+etrtgC a++ +++ ++++w++ +leleHnH+++
  PCP039849.1  57 DFYNLYGKEQGFGIRVSNSWFRSKKKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVIIRLVDSKRWRIVELELEHNHQVS 141
                  6*****************************************99888.....9**********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEEVSLNTEP VFDEGDDYEL EGDFTEHDHG TGETNRKKDP GEPTVGLEFD SFDEAYDFYN  60
LYGKEQGFGI RVSNSWFRSK KKERYRAKLS CSSAGFKKKS EANNPRPETR TGCPAMVIIR  120
LVDSKRWRIV ELELEHNHQV SPQIKRFYKS HKKMILAAKS AQPPPEPVTE VHTIKLYRTP  180
VMDVGCSGYS NFSETEALHR KRMKEVAADV ESRSSSFELR TRCNFEEQLR KVYTKEIFRR  240
FQLEVEGMYA CFNTRQVNVT GSILTYIVKE RVEVEGNEKE VRCYELE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-43FAR1 family protein