PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039681.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 344aa MW: 37740.1 Da PI: 6.9105

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039681.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.5	1e-33	20	131	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................ssssaseceaess 78 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ s+++++e PCP039681.1 20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELppwhpittsnhaaeaddpfrsSNPNPNE------ 111 79**************************************************************7777665544444444433321111111...... PP TCP 79 sssasnsssg..............kaaksaakskksqksaasalnlak 112 n++ PCP039681.1 112 ---------MviaaaepqsessagY-------------------NFNF 131 .........1111111111122221...................2221 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MKGCGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSSIDKL AELPPWHPIT TSNHAAEADD PFRSSNPNPN EMVIAAAEPQ 120 SESSAGYNFN FELHRQRQSD NDSNFNIPPS LDSDNIADTM KSFFPTNTSS NAAAASSIVD 180 FQSYAPDPHL ISTTTQDLGL SLHSFQDQSL NIHHNHTHTQ QSSQTLFATA MGIGLDSSSY 240 QRMVAWSNEN RGLDGGFVFN SHSHSYAQPQ LHHHGGTLQS SFTPSVSARA WQQQQQQHSS 300 IFGTRFGASD GSSPVFCIQG EEAENGVVSD RTASTSSPNS TRQL

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MKGCGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI KKAKSSIDKL AELPPWHPIT TSNHAAEADD PFRSSNPNPN EMVIAAAEPQ  120
SESSAGYNFN FELHRQRQSD NDSNFNIPPS LDSDNIADTM KSFFPTNTSS NAAAASSIVD  180
FQSYAPDPHL ISTTTQDLGL SLHSFQDQSL NIHHNHTHTQ QSSQTLFATA MGIGLDSSSY  240
QRMVAWSNEN RGLDGGFVFN SHSHSYAQPQ LHHHGGTLQS SFTPSVSARA WQQQQQQHSS  300
IFGTRFGASD GSSPVFCIQG EEAENGVVSD RTASTSSPNS TRQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-66	TCP family protein