PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039671.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 320aa    MW: 35584.6 Da    PI: 8.4262
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039671.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.63e-29167226159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  PCP039671.1 167 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQTILVGTYEGEHNHP 226
                  58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDHSAAYDDD TSLDLNSRPL RLFDDTPIIK QEVHNKISID FGRQPSPTEE SGRLLEELHR  60
VSAENKKLTE MLTVMGENYN ALRSQLLEYM SKNPEKELSP ISKKRKSESS NNNTNSNNIM  120
NGAVNGNSES SSSDGESFKK PREETIKAKV SRIYVRTEAS DTTSLVVKDG YQWRKYGQKV  180
TRDNPCPRAY FKCSFAPSCP VKKKVQRSVE DQTILVGTYE GEHNHPNPSQ IEATSGSNRM  240
TIGSVPYSTS LGSSGPTITL DLTKSKSSTA DAESTKTRTE TPEVRKFLVE QMASSLTKDP  300
DFTKALATAI SGRILQHNTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-91WRKY family protein