PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP039300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 240aa MW: 27803.6 Da PI: 9.5401 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 82.2 | 6.8e-26 | 127 | 212 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+aLi+ r ++++r +g k+ Wee+s km+e g+ rs +C+ekwen+nk+++++ +++kr + + + cpyf++le PCP039300.1 127 RWPEAEVQALITQRAAFKHKFRvAGTPKGRIWEEISVKMHEMGYVRSGRKCREKWENINKYFRRCMGSDNKR-PANAKLCPYFHELE 212 8*********************558999******************************************98.88889*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MEQKEQMHKQ LIEMVEKKEE ERLAREEAWK QQELDRLKRD KEIRAQETSS NLALISFIQN 60 YLGYEIQVPQ PSAATAPERA PAPTAAPIPI SVVPKYDHQR VEGNGKADNG MQRDLMLVSH 120 SDATDRRWPE AEVQALITQR AAFKHKFRVA GTPKGRIWEE ISVKMHEMGY VRSGRKCREK 180 WENINKYFRR CMGSDNKRPA NAKLCPYFHE LELLHKSALV SFGNGFNRTS NQNEANIEKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47660.1 | 7e-35 | Trihelix family protein |