PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 27482.6 Da PI: 5.193 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.8 | 2.5e-13 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEde+l v++ G+++W++ a++ g++R++ +c+ rw++yl PCP038979.1 15 KGLWLEEEDERLTTFVNLKGNRRWDALAKESGLRRSGRSCRMRWLNYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.2 | 1.6e-12 | 75 | 113 | 8 | 48 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 E++ ++++++++G++ W++Iar ++ gRt++++k+ w+++l PCP038979.1 75 EEKTILQLHQRWGNK-WSKIARALP-GRTDNEIKNDWRTHL 113 99*************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MMACQAAMDG EKLHKGLWLE EEDERLTTFV NLKGNRRWDA LAKESGLRRS GRSCRMRWLN 60 YLRPNVKHGQ ITIIEEKTIL QLHQRWGNKW SKIARALPGR TDNEIKNDWR THLKKKTQIP 120 DGNFQCTLNK NGRGLFCQEG DMNNEKYDFD QDHDSVKNSW ETKVTISDDL GLSDFAVTNS 180 PYETQLSDWI SELSSEQNGT VYNQDCNSVE SDLCHLTWTP DDSDTWDCPS FLWDMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 5e-54 | MYB family protein |