PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038774.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 300aa    MW: 34187.8 Da    PI: 9.0071
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038774.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.46.4e-2036119490
         FAR1   4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  n+YA + GFs+rk + ++ k n+ +t+r+f Cskeg++  ++   +++   + +trtgCka ++ + + +g+w+++++++ HnHela
  PCP038774.1  36 NAYALRKGFSLRKGHIRRDKSNN-VTQRDFLCSKEGFPLFKDLG-NDNMVDKLTTRTGCKALIRFSVN-QGVWKISHVNSIHNHELA 119
                  89****************97776.****************9999.899999****************9.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESNQEYVVA KAMEFEEDLK IGMVVYSDAE AFQVCNAYAL RKGFSLRKGH IRRDKSNNVT  60
QRDFLCSKEG FPLFKDLGND NMVDKLTTRT GCKALIRFSV NQGVWKISHV NSIHNHELAK  120
PEERQFLRSG RKIHDAHAGV ISSMVDAAEV YTNKIFKFFE IEYMSCLTVR LSEVSNEEGV  180
TIYEATEEEA MKLVEKDIKA KKASDKVKKK NSLSTSGVQD DDQHILDPPT VRAKGVTNKR  240
LKSALEKSKK VAKVRYTSKM SPPNTVVSEQ HNQEYINAPS NMTTLYPSFH DFYNQKQIEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-14FAR1 family protein