PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP038743.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 602aa MW: 67135.8 Da PI: 4.9317

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP038743.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89	6.5e-28	76	163	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dgkw ++++ +eHnHel p PCP038743.1 76 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---TSRRPTVKKTDCKASMHVKRRADGKWIIHEFIKEHNHELLP 163 5**************************************999888...7788889*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MDRNQNLGET VVDDPEKMSG GAVNENMNMV AVAEEVQNRG GGVITSPEKD VQVFEGEADF 60 EPCNGIEFES HEAAYSFYQE YAKSMGFTTS IKNSRRSKKS KEFIDAKFAC SRYGVTPESD 120 SGTSRRPTVK KTDCKASMHV KRRADGKWII HEFIKEHNHE LLPALAYHFR IHRNVKLAEK 180 NNIDILHAVS ERTRKIHTLI VLQMCGLSSI PSHYILKRWT KDAKIRQSMV EETERVQTRV 240 QRYNDLCKRA IELSEEGSSS EETYNIALRT LVEALKNCVN VNNSNGTVIE FSGTVHGIRE 300 AEEENQGIPT AKAIRKRNTN RKRKVPAKQD GVLVESQDSL QQMENLSSDG IALNGYYGAQ 360 QNVHGLVQLN LMEPPHDSYY VNQQSMQGLG QLNSIAPNHD GFFGAQQSIH GMGQLDFRPS 420 SSFGYSLQKL NPEVVPDPSF GLGSLSASEY VVQRKAGPNF ILLSRPSAAV WRQTALFDCV 480 ERDLELPPPS CEQDQLDIRS DKDVNIVDVT YEINVEAEPS SPIASDRVKE VDGLNAEQNV 540 GSDKHVDIVD ITGEVNVEEE RVSSLTMSDR VKEVDLNADQ SVGSDKDVDI VDVADAVNVE 600 EE

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MDRNQNLGET VVDDPEKMSG GAVNENMNMV AVAEEVQNRG GGVITSPEKD VQVFEGEADF  60
EPCNGIEFES HEAAYSFYQE YAKSMGFTTS IKNSRRSKKS KEFIDAKFAC SRYGVTPESD  120
SGTSRRPTVK KTDCKASMHV KRRADGKWII HEFIKEHNHE LLPALAYHFR IHRNVKLAEK  180
NNIDILHAVS ERTRKIHTLI VLQMCGLSSI PSHYILKRWT KDAKIRQSMV EETERVQTRV  240
QRYNDLCKRA IELSEEGSSS EETYNIALRT LVEALKNCVN VNNSNGTVIE FSGTVHGIRE  300
AEEENQGIPT AKAIRKRNTN RKRKVPAKQD GVLVESQDSL QQMENLSSDG IALNGYYGAQ  360
QNVHGLVQLN LMEPPHDSYY VNQQSMQGLG QLNSIAPNHD GFFGAQQSIH GMGQLDFRPS  420
SSFGYSLQKL NPEVVPDPSF GLGSLSASEY VVQRKAGPNF ILLSRPSAAV WRQTALFDCV  480
ERDLELPPPS CEQDQLDIRS DKDVNIVDVT YEINVEAEPS SPIASDRVKE VDGLNAEQNV  540
GSDKHVDIVD ITGEVNVEEE RVSSLTMSDR VKEVDLNADQ SVGSDKDVDI VDVADAVNVE  600
EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-73	FAR1 family protein