PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP038698.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 341aa MW: 38475.1 Da PI: 6.1836

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP038698.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.7e-15	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PCP038698.1 30 KGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 77 678*******************************************97 PP
2	Myb_DNA-binding	50	6.7e-16	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++ + lG++ W+ Ia++++ gRt++++k++w++ PCP038698.1 83 RGAFSPQEEELIIHFHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 126 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MRKPESIGKD DVDGAKTINK KKMMMSKLRK GLWSPEEDEK LMRYMLTNGQ GCWSDIARNA 60 GLQRCGKSCR LRWINYLRPD LKRGAFSPQE EELIIHFHSI LGNRWSQIAA RLPGRTDNEI 120 KNFWNSALKK RLKNNNMSTS TSSPNDSDSS DPRDPVVGGT FMPMHDHDMM TMYNMDSSSS 180 STTSMQAMAV NSNTLFNPFY MLDNRYDMAH ADDVVVNPTC FPHLPNTGDN QGHYGDYGNL 240 EGGHKMGLEG DLFLPPLESR SIKNNLNGQL VADNISKKNS SISNYHFHNS CFNNTELIGF 300 KVDEEEDMFG FGNINGGQGE SVRVGEWDFE GFMLDTSSFL S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	7e-70	MYB family protein