PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 221aa MW: 25215.3 Da PI: 10.1611 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 65.9 | 7.2e-21 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G ++WktIa++ g++R++k+c++rw++yl PCP038468.1 29 KGAWTAEEDQKLAEVIEIHGAKRWKTIASKAGLNRCGKSCRLRWLNYL 76 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.3e-17 | 82 | 127 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l PCP038468.1 82 RGNISEQEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MAPVTKDSIN RRKVKGGEAM KNTKREVNKG AWTAEEDQKL AEVIEIHGAK RWKTIASKAG 60 LNRCGKSCRL RWLNYLRPNI KRGNISEQEE DLIVRLHKLL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKR MNQKEKQNGA NLTRQMISID HQKDRVQMKE DLSSEEGATS TSTTSAASKG 180 GDQNSNINID VDDFFDFSNE GPLNLEWVSK FLGQDDGRWF N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-55 | MYB family protein |