PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038387.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 310aa    MW: 35931.6 Da    PI: 8.1534
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038387.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.41.9e-2677167190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +fY +Y+++ GF+vr++++++s+ n++i+ ++fvCskeg+r+++  +++++    + ++tr gC+a++++ +++  kw+vtk+++eHnH+l+
  PCP038387.1  77 EFYVAYGRRSGFTVRIHHNRRSRVNNQIIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLAQRDGPKWVVTKFVKEHNHKLM 167
                  6******************************************99883332.245899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDHQSIHGFD SDESDLDMHA ETYEHNEGIE DVLPENLDLC VDEKEETEEQ SADLPMNVEA  60
LEPYIGMEFN SRDEAREFYV AYGRRSGFTV RIHHNRRSRV NNQIIGQDFV CSKEGFRAKK  120
YVHRKDRVLP PPPVTREGCQ AMIRLAQRDG PKWVVTKFVK EHNHKLMSPS KVPWRGSGKH  180
LASEDEKDKR IRELSLELYN ERQKXIGKHF CPSLRRCCRS LWRGQAFFRT DLPAERRKDI  240
SISRQSVMAA GRVPHPPLKG PNVVKEIAMG IAVAIVAAMP WKMYQWDLQK RTRTMYELLD  300
KGEATVVAQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-29FAR1 family protein