PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 243aa MW: 27607.5 Da PI: 9.1603 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.9 | 1.4e-27 | 69 | 157 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Y++YA++vGF++r+ + ++s+r+g+i +r+f C+keg+r+++k+k+ + rr+r+etr gCka+++ +kek+gkw+vtkle H H++ PCP038326.1 69 EYYDAYATRVGFRIRVGNFHRSNRDGSINSRKFLCNKEGFRDNKKSKRGEVRRSREETREGCKAMIMARKEKSGKWVVTKLEIRHCHPM 157 69*************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTADPTPMES EADLNKPVVE SSVERDVPNT ESGEMLDSNN GTELIENKVN GILEPYVGME 60 FDSEEAVKEY YDAYATRVGF RIRVGNFHRS NRDGSINSRK FLCNKEGFRD NKKSKRGEVR 120 RSREETREGC KAMIMARKEK SGKWVVTKLE IRHCHPMWIS RGKKVTIPAP SQDEKDKKIR 180 ELSAELYRAN QQLAECRKTL EMVLKELKGM KARCSYARTR FLVPADAILF HTGADIGVSI 240 GIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 5e-47 | FAR1 family protein |