PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 28589.7 Da PI: 7.6456 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 5 | 50 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd+ll ++++q+G g W++ + g++R++k+c++rw++yl PCP038028.1 5 PWTKEEDQLLRKCIEQHGEGKWHRLPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1e-15 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eE +l+++++++lG++ W+++a++++ gRt++++k++w+ + PCP038028.1 56 RGNFEEEEVDLIIKLHRLLGNR-WSSVAARLP-GRTGNDVKNYWNCH 100 89********************.*********.***********977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGGIPWTKEE DQLLRKCIEQ HGEGKWHRLP LLAGLNRCRK SCRLRWLNYL RPNIKRGNFE 60 EEEVDLIIKL HRLLGNRWSS VAARLPGRTG NDVKNYWNCH LSKRLNAQQD HQSEYHINNK 120 HDAVRNINNG VKVIRSQASN SAGTSSSKRP SYAPTPHQPV IVFVQDEGSS TGPMPKLCNF 180 NGNGQNNNQI FENNNSTGIN ASHHPMDDDL PPFDQQVKEY HQGSDDGDQV NRKWEWDDSI 240 FADMDIWTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-51 | MYB family protein |