PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP037960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 176aa MW: 20167.6 Da PI: 10.48 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.9 | 1.4e-16 | 88 | 173 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k +++s+v++ +l+lpk+f+ + + + tltle e g++++v++ + ++ + ++GW++F+ an+L +g +vF+l++ +f++ PCP037960.1 88 FVKSMIRSNVSSCFCLTLPKQFCHLY--LPLHDATLTLEVEGGEKYRVTF--LGERR--IVSAGWQKFCTANKLLVGNLLVFRLVRPLKFKC 173 89*********************555..3455679***************..66653..4688********************998666655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MLAVRLQVEV EQREQTLETK QNVLSTCRRP SRPTHITKRK VPGHPQKHGD GGCKRKRTIF 60 DSFKDHEISF VRNQVQDIQA NLGADPVFVK SMIRSNVSSC FCLTLPKQFC HLYLPLHDAT 120 LTLEVEGGEK YRVTFLGERR IVSAGWQKFC TANKLLVGNL LVFRLVRPLK FKCFIG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 57 | KRKVPGHPQKHGDGGCKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 3e-25 | B3 family protein |