PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037818.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 373aa MW: 42157.4 Da PI: 9.5469

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037818.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.7e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++mg + R +k+c +rw +yl PCP037818.1 4 RQRWQPEEDALLRAYVKQYGPKEWSLVSQRMGkpLLRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.9	8.2e-12	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l v + +++G++ Wk+Ia++++ gRt+k + +w + PCP037818.1 59 KGSLTPEEQALVVSLQAKHGNK-WKKIAAELP-GRTPKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MKERQRWQPE EDALLRAYVK QYGPKEWSLV SQRMGKPLLR DPKSCLERWK NYLKPGLKKG 60 SLTPEEQALV VSLQAKHGNK WKKIAAELPG RTPKRLGKWW EVFKEKQLKL XXXXXXXXXX 120 XXXXXXSSTQ LPPDMNIAVA GIGSPEKAVK GPYDHILETF AEKYVVQPKV YGAAFQSTTM 180 MQEPDPVLSL GSVGSTATSV TAPSVMPQWM NINPSSTTSS TSSTTPSPSV SLTLSPSDPV 240 PDTDPTRFYQ MGTLIQLCKE VEEGMQSWMQ QKKEATWRLS RLEQQLEAEK GRKQREAVEE 300 IEAQIRCLRQ EEVALVGRIE RDYREELSAL QREAEGKEAK FVEAWCGKHA KLAKLVEMIA 360 VGVRNHGFSS KPC

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MKERQRWQPE EDALLRAYVK QYGPKEWSLV SQRMGKPLLR DPKSCLERWK NYLKPGLKKG  60
SLTPEEQALV VSLQAKHGNK WKKIAAELPG RTPKRLGKWW EVFKEKQLKL XXXXXXXXXX  120
XXXXXXSSTQ LPPDMNIAVA GIGSPEKAVK GPYDHILETF AEKYVVQPKV YGAAFQSTTM  180
MQEPDPVLSL GSVGSTATSV TAPSVMPQWM NINPSSTTSS TSSTTPSPSV SLTLSPSDPV  240
PDTDPTRFYQ MGTLIQLCKE VEEGMQSWMQ QKKEATWRLS RLEQQLEAEK GRKQREAVEE  300
IEAQIRCLRQ EEVALVGRIE RDYREELSAL QREAEGKEAK FVEAWCGKHA KLAKLVEMIA  360
VGVRNHGFSS KPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-89	MYB family protein