PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037584.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 566aa MW: 63016.4 Da PI: 6.755

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037584.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.7	1.9e-08	485	523	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + PCP037584.1 485 MFQNflHPYPKDSEKHVLAVKSGLTRNQVSNWFINARVR 523 5787779******************************88 PP
2	BELL	73.2	4.4e-24	360	428	2	71
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 +qe+++kk+kLl ll+ +d+ Y+q+ ++++tv+s+F+a+++ ++ ++++++Al+++S +++L+++i+ + PCP037584.1 360 KQEIKAKKTKLLALLQTLDDCYNQCADEIHTVVSAFHAATETDP-HIHARFALQTVSLLYKSLRERISTH 428 589***************************************.********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDNEMYNCPA DGRSSLVMDG VVPHTTMNSL IQSYSFDLDH QNRMMALIPG LSTFHGEPVV 60 DSDSDLTAAN GVSVAETSPF LTSQRRNNVG DSSFVSSSFT DNTVFQATPQ SSASLAALFA 120 ARNSSLQENL NNLAISAMPI NSSEAYVSND CSNNSNSPFA TSVNCGYDEM LGSINRQWEI 180 NKYAALSELG ERSSVRTGLQ PCSSVGNVDP NGWLSSDGAS VMTYNSYSSA KFSNELALTL 240 AMSRPLDIGN QYPDVGSSGI AQPCLNQTRF ASLERNSSNS EKPSPSYSSC KPPQLSQVIC 300 GSRYLHVVQE ILSDIANYSL ENLDQSSFSS VRLVSERGMS VMDDGLDGRF EVPMEPAVRK 360 QEIKAKKTKL LALLQTLDDC YNQCADEIHT VVSAFHAATE TDPHIHARFA LQTVSLLYKS 420 LRERISTHFL SISENSSPAS PSESERSFEI QKQLALQHLK KKEHQIWRPQ RGLPERSVSV 480 LRAWMFQNFL HPYPKDSEKH VLAVKSGLTR NQVSNWFINA RVRLWKPMID EMYSEMNRRK 540 TRQNENLERN HKSHHIRINT HKFGVN

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDNEMYNCPA DGRSSLVMDG VVPHTTMNSL IQSYSFDLDH QNRMMALIPG LSTFHGEPVV  60
DSDSDLTAAN GVSVAETSPF LTSQRRNNVG DSSFVSSSFT DNTVFQATPQ SSASLAALFA  120
ARNSSLQENL NNLAISAMPI NSSEAYVSND CSNNSNSPFA TSVNCGYDEM LGSINRQWEI  180
NKYAALSELG ERSSVRTGLQ PCSSVGNVDP NGWLSSDGAS VMTYNSYSSA KFSNELALTL  240
AMSRPLDIGN QYPDVGSSGI AQPCLNQTRF ASLERNSSNS EKPSPSYSSC KPPQLSQVIC  300
GSRYLHVVQE ILSDIANYSL ENLDQSSFSS VRLVSERGMS VMDDGLDGRF EVPMEPAVRK  360
QEIKAKKTKL LALLQTLDDC YNQCADEIHT VVSAFHAATE TDPHIHARFA LQTVSLLYKS  420
LRERISTHFL SISENSSPAS PSESERSFEI QKQLALQHLK KKEHQIWRPQ RGLPERSVSV  480
LRAWMFQNFL HPYPKDSEKH VLAVKSGLTR NQVSNWFINA RVRLWKPMID EMYSEMNRRK  540
TRQNENLERN HKSHHIRINT HKFGVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	5e-76	TALE family protein