PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037223.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 432aa    MW: 48556.4 Da    PI: 9.1038
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037223.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55e-056183123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C +C+k +  +s++k H++t+
  PCP037223.1 61 WVCDKCSKGYAVQSDYKAHLKTC 83
                 58*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MHRRRHKVPW KLLKRESPVV KKRVFVCPEP SCLHHDPCHA LGDLVGIKKH FRRKHSNHKQ  60
WVCDKCSKGY AVQSDYKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDACN MDRVRPESQT  120
LQPGACLSRT ASSPSPSCSD NNFSRAPSTW PPSNNLVLPH PSPTEYTKLI LNNPPAHADH  180
HQATLSKKNS SNAHYNLDLQ LATTSNNNIP INEVSVSSKR EENHSTQLQL SIGSCEFGGG  240
GHSHQNKNIE QHSNIMIANQ NYSPRENEMK ERERESSSTT TNHHERDDDD QKPKLAATAA  300
GVLRLKEEAR EQLRLAMAEK AYANEARQQA ERHIELAQKE FANAKRIRQQ AQAELDKAHA  360
LKEQAVKKVN STILQITCHA CNKQFIQGAH EAKTNQHCLV LSYMSSAIAS EGDHLLEKNI  420
STRTHHAKSA NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01940.23e-86C2H2 family protein