PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP037095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 91aa MW: 9973.99 Da PI: 4.5962 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 24.6 | 2.8e-08 | 1 | 79 | 6 | 89 |
GRAS 6 lecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 +e+A+a+s+++ e+a ++L+r++ + a+p+ ++ qRl ++ AL++r++ + + p e +e++ +++ ++e+sP PCP037095.1 1 MEAATAISDEKSEAAMEILTRMNSTqvANPRPSSEQRLLEFVGLALKSRVNP----IDNPAPIAELF---RQEHTGSTQSLYELSP 79 689*******************9988799999*******************9....55555555554...7888888999999999 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 91 aa Download sequence |
MEAATAISDE KSEAAMEILT RMNSTQVANP RPSSEQRLLE FVGLALKSRV NPIDNPAPIA 60 ELFRQEHTGS TQSLYELSPX GSNKALIIEK D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52510.1 | 8e-15 | GRAS family protein |