PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | G2-like | ||||||||
Protein Properties | Length: 200aa MW: 22804.8 Da PI: 6.9613 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 95.3 | 4.6e-30 | 40 | 94 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH++Fve+v+ LGG+ kA Pk+il+lm+v+gLt+ hvkSHLQk+R PCP036846.1 40 KTRIRWTQDLHQKFVECVNCLGGAYKAPPKSILKLMNVDGLTIFHVKSHLQKFRN 94 68****************************************************6 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.2e-13 | 44 | 93 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v++v+ lGg +k+I + m+ g+t ++ks++qk++ PCP036846.1 44 RWTQDLHQKFVECVNCLGGAykaPPKSILKLMNvDGLTIFHVKSHLQKFR 93 9*****************99****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MNEQKIDFQE RIQQSHDYIS EFVSTTYGYS PSGRHVLSSK TRIRWTQDLH QKFVECVNCL 60 GGAYKAPPKS ILKLMNVDGL TIFHVKSHLQ KFRNAAFPPG SAKGKSEKRT TSNVEPQLDV 120 ETGLHIKKAI QLELDVQQHL HEQLEIQRNL QLQIEEQGKQ LKNISELLID LQLKNSDTTF 180 YEGAPLSSLD DEFIGLSINT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 6e-59 | G2-like family protein |