PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP036835.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 475aa MW: 53931.6 Da PI: 6.1231

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP036835.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.6e-18	215	261	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+q+G + W+ Ia++++ gR +kqc++rw+++l PCP036835.1 215 KGQWTIEEDRLLIQLVEQFGVRKWSHIAQMLP-GRIGKQCRERWHNHL 261 799***************************.***********97 PP
2	Myb_DNA-binding	58.2	1.8e-18	267	309	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ PCP036835.1 267 KDTWSEEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 309 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MELNNLRENL VSQIYVPLLA PENYVKPCTT KDELLFEGSS SSKGNYNYLQ DFHHLDHQFQ 60 VNVFSSNPMF GTHSPCFDPY NDTSYPYDQN SSHQDVNFYE CKPLNVAENN GAHGQVLDNF 120 QGGSYLKFST HPRSSNPLDH VVGTLSHMTA TNFLPLDCSQ DIKPVNFLVP DEVSCINNAD 180 QNAYYRKFGM NGRSGVTGVT RGSTVKGRKK SNVVKGQWTI EEDRLLIQLV EQFGVRKWSH 240 IAQMLPGRIG KQCRERWHNH LRPDIKKDTW SEEEDKILIQ AHAEIGNKWA EIAKRLPGRT 300 ENSIKNHWNA TKRRQYSKRK CRSKCARSSV LQEYIKSLNL DSASNSTGRQ RKNSSANNNG 360 VSTSTKAAAA AHQPQTNLEF SSANDQLVPS YNDFNEDPNF CFDENIFEEG CSIDSLLDDI 420 PCAPDVGEKN SNFDGKNQID YGNVDKGNFD EKDFDVQMQV DWESNEVKKE MDLVE

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MELNNLRENL VSQIYVPLLA PENYVKPCTT KDELLFEGSS SSKGNYNYLQ DFHHLDHQFQ  60
VNVFSSNPMF GTHSPCFDPY NDTSYPYDQN SSHQDVNFYE CKPLNVAENN GAHGQVLDNF  120
QGGSYLKFST HPRSSNPLDH VVGTLSHMTA TNFLPLDCSQ DIKPVNFLVP DEVSCINNAD  180
QNAYYRKFGM NGRSGVTGVT RGSTVKGRKK SNVVKGQWTI EEDRLLIQLV EQFGVRKWSH  240
IAQMLPGRIG KQCRERWHNH LRPDIKKDTW SEEEDKILIQ AHAEIGNKWA EIAKRLPGRT  300
ENSIKNHWNA TKRRQYSKRK CRSKCARSSV LQEYIKSLNL DSASNSTGRQ RKNSSANNNG  360
VSTSTKAAAA AHQPQTNLEF SSANDQLVPS YNDFNEDPNF CFDENIFEEG CSIDSLLDDI  420
PCAPDVGEKN SNFDGKNQID YGNVDKGNFD EKDFDVQMQV DWESNEVKKE MDLVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-100	MYB family protein