PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 143aa MW: 16090.4 Da PI: 4.7268 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54 | 3.1e-17 | 27 | 116 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 f+ v t+++v s ++v+p kf ++ + +s t+ + g+ We+++ + +sg+ + ++W+eFv++n+Lk+gD +vF+l + s+++lv++v PCP036374.1 27 FEVVITKANVKPSYQMVIPAKFQQTL---PSCS-IPTVLTFGGKNWEMTY--THGSGQRKFDTNWREFVNDNNLKVGDACVFELLECSSTKLVFRV 116 77889999999***********8655...3344.4577899*********..888888889**********************8755777777665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MGDQPTSNSM IELQGDEFWP LSEKPFFEVV ITKANVKPSY QMVIPAKFQQ TLPSCSIPTV 60 LTFGGKNWEM TYTHGSGQRK FDTNWREFVN DNNLKVGDAC VFELLECSST KLVFRVQILR 120 GDIPSELLGK LKGETVDAPI IID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 3e-10 | B3 family protein |