PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 95aa MW: 10159.6 Da PI: 6.7888 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 39.1 | 9.3e-13 | 1 | 31 | 21 | 51 |
HHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyeyss 51 +KKA ELS+LC+ e+aviifs+t+kl ++ss PCP036231.1 1 MKKAGELSILCESEAAVIIFSQTDKLLDFSS 31 8***************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MKKAGELSIL CESEAAVIIF SQTDKLLDFS SSRTRGEDSS AASILASSVF YLVPSTRHGE 60 GLRLPAGRIP ISAIASFPSS HINSTHEIPI IPVNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22630.1 | 4e-09 | MIKC_MADS family protein |