PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035911.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 316aa    MW: 34907.5 Da    PI: 6.9091
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035911.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.11.8e-33168225259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s+fprsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+
  PCP035911.1 168 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCGVKKRVERSYEDPSTVITTYEGQHNHQ 225
                  8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MSDHEPKDLY YHDLFQYEAH EHLNGGMVSI NDHQNLQGFD VNPSYMNFTE CSKGSVDYNS  60
LATAFGLSSS TSEALFSSVE GNQNAVDDLG GGGGETPLTP NSSVSSSSAE ADADKDCGKN  120
KKDRQPKGSS EDGDSSKKVS KPAKKKGEKK QKEPRFAFMT KSEVDHLEDG YRWRKYGQKA  180
VKNSPFPRSY YRCTTQKCGV KKRVERSYED PSTVITTYEG QHNHQLPANL RGNAAAALFP  240
PSMLNLSNLA AGGPSSTFPQ ELLFQMPQYM ISSNVNQGSS RNPNHHLQQY QLPHAAADQY  300
GLLQDFAPSM FLKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-53WRKY family protein