PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035891.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 312aa    MW: 34221.3 Da    PI: 6.4017
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035891.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.47.1e-29138198259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqKe+ +s+fprsYYrCt++   +C +kk v+r ++dp+++e+tY+geH+++
  PCP035891.1 138 EDGFTWRKYGQKEIINSRFPRSYYRCTHQklyNCLAKKLVQRLDDDPSTFEVTYRGEHTCH 198
                  7****************************999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDEFISLILH GCELARELGK DLPNLATQPN SLFNSLEESQ RFLVQQKKGF YIVKIQARDI  60
IQTQLAADRN EAKISGGIDI RGSEAAVMGS QAVDVVPASD VNIASSSSQR PRQRKDQGLI  120
SKMTVPAPRI GNTEIPPEDG FTWRKYGQKE IINSRFPRSY YRCTHQKLYN CLAKKLVQRL  180
DDDPSTFEVT YRGEHTCHMS ATAPSILPPA ADHHITQDQL AATTESPTSR WLSMDVNPIR  240
GGSSSGGMIG GSCGGGGDDV GTSTGTRYTG KEVDFPVMDL ADAMFNSGGS SSSMDFIFNS  300
AERRWEPDDK KH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.18e-54WRKY family protein