PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035881.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 599aa MW: 67100.6 Da PI: 7.8305

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035881.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.4	1.9e-32	175	289	1	89
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasecea 75 a+g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el ++ PCP035881.1 175 ATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELEELpswnphsisttaavpametqnpsA--------- 263 589**************************************************************665554444444444333333220......... PP TCP 76 esssssasnsssg........................k 89 + + PCP035881.1 264 ------------TgihcfaavdaigsanrrtmvgsgvS 289 ............13334444444443333333322110 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MELKTLNGRA FPKSQKQKKP NQEKQKQFQG SEGRNHHHHY LHQNPILNFT HLVQEEEEEE 60 TQQQTQQNHH QAFNFPYLHQ DPHTQQEHQH FFGETQQQTQ QRAPKKRSCT SSSSSTLVEQ 120 SIEYARSKME DSHHHHLNNH QATTSSRLGI RPPSSGGGVG TDIVEVVRGS HIVRATGRKD 180 RHSKVCTAKG PRDRRVRLAA HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELEELP 240 SWNPHSISTT AAVPAMETQN PSATGIHCFA AVDAIGSANR RTMVGSGVSE QQFAQNPNSN 300 STFLPPSLDS DAIADTIKSF FPMGASAATA AAEAPSSTIQ FHQNYPPDLL SKASSQSQDL 360 RLSLQSFQDP ILLHHHDSQN QHHHAQTHQN EQTLFSGSQN QLGFDGTSGS WAEHHHNQQQ 420 QEMNRFQRMV AWNSGGGDSG GNGGPSSAGG FIFNSLLPTQ QGSTSPLQQQ QQSLFGQSQF 480 FSQRGPLQSS NSPSVRAWMM DQQNQQSISH DHHHQISQSI HHQQSISGMG FASGGGFSGF 540 HIPARIHGEE EHDGLKLSSH LCLPQRYYKS YLLVPNSYMA RRRFFGRFVQ WRAPWDEEI

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MELKTLNGRA FPKSQKQKKP NQEKQKQFQG SEGRNHHHHY LHQNPILNFT HLVQEEEEEE  60
TQQQTQQNHH QAFNFPYLHQ DPHTQQEHQH FFGETQQQTQ QRAPKKRSCT SSSSSTLVEQ  120
SIEYARSKME DSHHHHLNNH QATTSSRLGI RPPSSGGGVG TDIVEVVRGS HIVRATGRKD  180
RHSKVCTAKG PRDRRVRLAA HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELEELP  240
SWNPHSISTT AAVPAMETQN PSATGIHCFA AVDAIGSANR RTMVGSGVSE QQFAQNPNSN  300
STFLPPSLDS DAIADTIKSF FPMGASAATA AAEAPSSTIQ FHQNYPPDLL SKASSQSQDL  360
RLSLQSFQDP ILLHHHDSQN QHHHAQTHQN EQTLFSGSQN QLGFDGTSGS WAEHHHNQQQ  420
QEMNRFQRMV AWNSGGGDSG GNGGPSSAGG FIFNSLLPTQ QGSTSPLQQQ QQSLFGQSQF  480
FSQRGPLQSS NSPSVRAWMM DQQNQQSISH DHHHQISQSI HHQQSISGMG FASGGGFSGF  540
HIPARIHGEE EHDGLKLSSH LCLPQRYYKS YLLVPNSYMA RRRFFGRFVQ WRAPWDEEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-67	TCP family protein