PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035690.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 436aa    MW: 48919.4 Da    PI: 10.0454
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035690.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-18141228196
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                  f+k++++s+v +  +l lp +f++e+ +k ++  +++lede+g++++  +   +++ +  l++GW+ F+ +++L++gD +vF+l++ ++f  ++ +
  PCP035690.1 141 FVKTMVRSHVYSCFWLGLPTRFCDEYLSK-TG-SDMVLEDEHGKEYDAVY--IGSRTG--LSGGWRAFALEHKLDDGDALVFELTEPTRF--KIYI 228
                  89************************655.34.49***************..566544..***********************9876666..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MVAIAATTYE EARNQRLEEN KRKFQDLGIS SISKTLTHLT ASPNKTQHRV SKPKARNACL  60
DIEPRRSSRQ RNTVQTYRDE VDIDLSSLRK RSRSRSSSSF CGSYLARPME EVRLCSYEER  120
QAALKAAEKL LENLQTDNPS FVKTMVRSHV YSCFWLGLPT RFCDEYLSKT GSDMVLEDEH  180
GKEYDAVYIG SRTGLSGGWR AFALEHKLDD GDALVFELTE PTRFKIYIVK VSSMSSIKSI  240
VDKEDSPSAE NTLKTAVKPN SESTQKRRTK RGSVSDIDDS QPSPGSESDQ RRRSKRGIVP  300
PTDDAKVPTD LESNQIRRSK RGAAPVADDS KTNFNSESNQ LRSPVYNKLC IADVKEVISV  360
LLSRKFKLQT TRSSEFMGFR DEVSRNATLE SDIIVVVIGS GIWPKSKSFK TNVLVLFPKG  420
GKVIAFAQLH LLGKGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19095KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-51B3 family protein