PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035620.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 790aa MW: 91244.1 Da PI: 6.2691

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035620.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.4	8.4e-22	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w++ ++ leHnH l PCP035620.1 60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRILEVTLEHNHLL 143 69***************************************9988.....99*******************************87 PP
2	FAR1	70.4	4.2e-22	425	507	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+v+++eleHnH ++ PCP035620.1 425 FYNCYAKQQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDSNRWRVIEIELEHNHLIS 507 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MEVASLDGEQ VPDGECNEIV TDGDGVLTES DVQNGVTEGR KEFVAPAVGM EFESYDDAYN 60 YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI 120 RMRLVDSKRW RILEVTLEHN HLLGAKMYKS INKMGSGTKR KSQSSSDAEK RTIKLYRALL 180 SKVYTREIFE KFQFEVEEMY SCLSTTQLHV DGPIIIFLVK ERVVVEGSRR EIRDYEVLYN 240 RTAGEVRCIC SCFNFYGYLC RHALCVLNYN GVEEIPSKYI LPRWKKDYKR LYIPDQGSSN 300 VDATDRVQWF NQLYRSALHI VEEGTKTIAA EEDEDFKKLS EFSWEVGTES RVPYQLVSWF 360 RIGLKMDEVS LNTEPAGQDD ADEFEIEGDC AMTDFISQTG IIQGENPLPP VVGMEFDSYE 420 DVYYFYNCYA KQQGFGVRVS NTWYRKSKER YRGKLSCSSA GFKKKSEANR PRPETRTGCP 480 AMIKFRLMDS NRWRVIEIEL EHNHLISPAS GKFYKSHKAI GVGTKRALQM DTSEDVQKIR 540 LFRTVIVDSE GNGSMDGDEG ESGNRVDYSS QDTPLKEFLD KYDQALQTHH HLEALADLDS 600 RNSSYTLESR CYFELQLSKL YTNDILRKFE KEVEGMYSCF STSQLNADGP VKTYVVKEQT 660 ESDGNRRETR DYEVLYNPSE MEILCICGMF NLRGYLCRHA LSVLNQNGVE EIPAQYVLSR 720 WRKDIERNYI FYHSCSGIDI NNPVHRYDHL YKCIVQVVEE GRKSEGRYKV ALGALDEMLK 780 KLCLTEDPAL

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MEVASLDGEQ VPDGECNEIV TDGDGVLTES DVQNGVTEGR KEFVAPAVGM EFESYDDAYN  60
YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI  120
RMRLVDSKRW RILEVTLEHN HLLGAKMYKS INKMGSGTKR KSQSSSDAEK RTIKLYRALL  180
SKVYTREIFE KFQFEVEEMY SCLSTTQLHV DGPIIIFLVK ERVVVEGSRR EIRDYEVLYN  240
RTAGEVRCIC SCFNFYGYLC RHALCVLNYN GVEEIPSKYI LPRWKKDYKR LYIPDQGSSN  300
VDATDRVQWF NQLYRSALHI VEEGTKTIAA EEDEDFKKLS EFSWEVGTES RVPYQLVSWF  360
RIGLKMDEVS LNTEPAGQDD ADEFEIEGDC AMTDFISQTG IIQGENPLPP VVGMEFDSYE  420
DVYYFYNCYA KQQGFGVRVS NTWYRKSKER YRGKLSCSSA GFKKKSEANR PRPETRTGCP  480
AMIKFRLMDS NRWRVIEIEL EHNHLISPAS GKFYKSHKAI GVGTKRALQM DTSEDVQKIR  540
LFRTVIVDSE GNGSMDGDEG ESGNRVDYSS QDTPLKEFLD KYDQALQTHH HLEALADLDS  600
RNSSYTLESR CYFELQLSKL YTNDILRKFE KEVEGMYSCF STSQLNADGP VKTYVVKEQT  660
ESDGNRRETR DYEVLYNPSE MEILCICGMF NLRGYLCRHA LSVLNQNGVE EIPAQYVLSR  720
WRKDIERNYI FYHSCSGIDI NNPVHRYDHL YKCIVQVVEE GRKSEGRYKV ALGALDEMLK  780
KLCLTEDPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-75	FAR1 family protein