PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP035580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 200aa MW: 23471.7 Da PI: 9.9874 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 7.7e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll + ++ +G g W+ ++ + g++R++k+c++rw++yl PCP035580.1 13 KGAWTREEDDLLRQSIEIHGEGKWHQVPYRAGLNRCRKSCRLRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.4e-16 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP035580.1 66 RGDFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTGNDVKNYWNT 109 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEGYNVNLSV MRKGAWTREE DDLLRQSIEI HGEGKWHQVP YRAGLNRCRK SCRLRWLNYL 60 KPNIKRGDFT EDEVDLIIRL HKLLGNRWSL IAGRLPGRTG NDVKNYWNTR LRINSRMKTV 120 QNKSQETRKT IVIRPQPRSF IKSSNYLSSK EPIIDHIQSE EDLSTSSQMS SLTNDGNDWW 180 KTLLEDEDIL LKELHVPVLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-60 | MYB family protein |