PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035122.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 230aa MW: 26215.3 Da PI: 6.0976

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035122.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	20	63	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT Ed+ + +a +++ + +W++Ia +++ g+t+k++ +++ PCP035122.1 20 PWTRLEDKVFEQALVRFPEDlpdRWERIAGELP-GKTPKEVLEHY 63 8******************************.********9 PP
2	Myb_DNA-binding	47	6e-15	113	157	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky PCP035122.1 113 PWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKY 157 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MFQETAPCWS SVVQSAASTP WTRLEDKVFE QALVRFPEDL PDRWERIAGE LPGKTPKEVL 60 EHYDDLVHDV LEIDSGRVNL PSYADESMVG WEDTASQITF GSNRETERKK GTPWTEEEHK 120 LFLIGLKKFG KGDWRSISRN VVVTRTPTQV ASHAQKYFLR QTSMKKERKR SSIHDITTVE 180 SNSVSVPADR NWIPPPAVPA HQSPLQHLTQ QSHLPDQGDL SGYQDFGYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	8e-70	MYB family protein