PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034804.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 158aa    MW: 17467.4 Da    PI: 7.9498
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034804.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00014668123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++C + F ++  L  H++ H
  PCP034804.1 46 FSCNYCQRKFYSSQALGGHQNAH 68
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MDFQPNTSLH LNLPNNQLNL ELVLEPSSTS SSSSSFSPTL EPQRMFSCNY CQRKFYSSQA  60
LGGHQNAHKL ERTLAKKSRE QLSSAARAHS SMNQRPGSNY SCSSDSSTSH ARDIPQAHLG  120
GLKVHQGHAG RLVGEMNCGF RPENVEEDIC HLDLSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.14e-22C2H2 family protein