PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034779.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 389aa MW: 43446.6 Da PI: 6.7203

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034779.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	316	350	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ PCP034779.1 316 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 350 569*****************************885 PP
2	ELK	41	4e-14	270	291	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ PCP034779.1 270 ELKGQLLRKYSGYLGSLKQEFM 291 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEGVGANGTC SMMAFGENSS NGGGMCPMMM MPLMTSSHHA HHSHHHLHQH HMNLNPNADT 60 HNTSTTHQFP QLPQLPPSNN HHDHQNPHNT SGGSSFLLHN PVAAAASYFM DNNNNDGVGG 120 SSSSSPSTVK AKIMAHPHYH RLLASYINCQ KVGAPPEVVA RLEEACASAA TIGQMVSSSS 180 ESGSLGEDPA LDQFMEAYCE MLTKYEQEIS KPFKEAMIFI QRIESQFKAL TLSSSDSAGY 240 GDGIDRNNVS SEEEVDVNNN FIDPQAEDRE LKGQLLRKYS GYLGSLKQEF MKKRKKGKLP 300 KEARQQLLDW WSRHYKWPYP SESQKLALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFV 360 VMDASHQGHY YMDSVMGNPF PMDISPTLL

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEGVGANGTC SMMAFGENSS NGGGMCPMMM MPLMTSSHHA HHSHHHLHQH HMNLNPNADT  60
HNTSTTHQFP QLPQLPPSNN HHDHQNPHNT SGGSSFLLHN PVAAAASYFM DNNNNDGVGG  120
SSSSSPSTVK AKIMAHPHYH RLLASYINCQ KVGAPPEVVA RLEEACASAA TIGQMVSSSS  180
ESGSLGEDPA LDQFMEAYCE MLTKYEQEIS KPFKEAMIFI QRIESQFKAL TLSSSDSAGY  240
GDGIDRNNVS SEEEVDVNNN FIDPQAEDRE LKGQLLRKYS GYLGSLKQEF MKKRKKGKLP  300
KEARQQLLDW WSRHYKWPYP SESQKLALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFV  360
VMDASHQGHY YMDSVMGNPF PMDISPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	295	LKQEFMKKRK
2	292	296	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-136	TALE family protein