PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP034689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37203.3 Da PI: 4.928 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.5e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl PCP034689.1 13 RGLWSPEEDEKLLNHINTYGHGSWSSVPQLAGLERCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.2 | 1.1e-14 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E+ +v++++ lG++ W+ Ia++++ gRt++++k++w++ PCP034689.1 66 RGSFSEIEERTIVEVHRILGNK-WAQIAKHLP-GRTDNEVKNFWNS 109 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGHNCCSKQK VKRGLWSPEE DEKLLNHINT YGHGSWSSVP QLAGLERCGK SCRLRWINYL 60 RPDLKRGSFS EIEERTIVEV HRILGNKWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGF 120 DPNTHNLLPS SKANPSNIIN NNNNNNNIHA CNMFSSSSVF SVNSSHVSAD TSIDILEAPY 180 LTLPSTSSPN ANHESSTIST YEFQNPNIVW STTPVQGQIN PIFLPESMGI NSVPTISTSH 240 SYPISELENI VNESFQPITK STNPEDIQLQ SQQEEACEVV EDEEANGLDG AQTNMDVSFG 300 SSNFDMDFME STVLPCGMYN YQLSPMDQLA WNC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 7e-82 | MYB family protein |