PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP034401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 27502.6 Da PI: 5.2 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.6 | 5e-17 | 15 | 59 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W t+Ed l+++v+q+G+ +W++I+ ++ gR++k+c++rw + PCP034401.1 15 GSWNTQEDATLIKLVAQHGPSNWSLISTGIP-GRSGKSCRLRWCNQ 59 89*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.4e-18 | 67 | 109 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++++Ed ++++a++++G++ W+tIar ++ gRt++ +k++w++ PCP034401.1 67 KPFSPQEDSIIIQAHALHGNK-WATIARLLP-GRTDNAIKNHWNS 109 689******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MTMMGAMSGE DRVTGSWNTQ EDATLIKLVA QHGPSNWSLI STGIPGRSGK SCRLRWCNQL 60 CPTVQHKPFS PQEDSIIIQA HALHGNKWAT IARLLPGRTD NAIKNHWNSA LRRRRRQLAE 120 LSSSSSGSDA AAALGEEPDL KRQCLRASPE HESLKAGAGG EGVIVETSLT LSPPGEKAEK 180 DVAVKSEEEE HDHEAVDNDD DVEKCAVEME ETCLLTIMQR MIAQEVRNYI DSLRGDGGPT 240 FGPQSEAHQN DA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 9e-48 | MYB family protein |