PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034207.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 236aa MW: 26635 Da PI: 9.6966

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034207.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.5	1.7e-21	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ PCP034207.1 90 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	118.3	3.3e-38	90	151	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq PCP034207.1 90 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 151 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MSSMKVHQFA RGLWEHEPSL TLGCTKRLRP LAPRLANTAA TSDTTTTLAP FDLKSFIRPE 60 SSPRKLGSSN QLQEKKDSPH PQVESHPGGT RWNPTQEQIG ILEMLYRGGM RTPNAQQIEQ 120 ITAQLGKYGK IEGKNVFYWF QNHKARERQK QKRSSLGLSH SPRTPTSVIT TLGEVVVERE 180 EDNPYKRKGR SWEFDCLVEG DHSSSTSSVV CKLDNDDAIE GGRTLELFPL HPEGRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	9e-71	WOX family protein