PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP034146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 141aa MW: 16701.8 Da PI: 9.3447 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 22.2 | 1.5e-07 | 58 | 101 | 12 | 55 |
GRAS 12 vssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 ++++d +a + L r +e +s + dp++R+a+yf+e L +r++ PCP034146.1 58 LTESDIDRAAKSLIRHRESVSDQEDPTERVAFYFAEELYNRVLV 101 578999***********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MLISVSMAPI RFNPIARVNL ATLTLHRPIS TESYSPKPRT NCQRELYRHR YHNNYTRLTE 60 SDIDRAAKSL IRHRESVSDQ EDPTERVAFY FAEELYNRVL VLQLEKSHTK VYDTSCDDFT 120 LSYKAWENSR SRRVKMTLET N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66770.1 | 4e-11 | GRAS family protein |