PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP033988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 207aa MW: 23201 Da PI: 8.2055 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G ++Wkt+a+ g++R++k+c++rw++yl PCP033988.1 15 KGPWTGEEDRKLAEYIEIHGAKRWKTVASIAGLNRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45 | 2.5e-14 | 72 | 113 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +E++l+++++k+lG++ W++Ia +++ gRt+ ++k++w+++l PCP033988.1 72 ADDEEDLILRLHKLLGNR-WSLIAGRLP-GRTDSEIKNYWNSHL 113 579***************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MAPKNDASTK KPVNKGPWTG EEDRKLAEYI EIHGAKRWKT VASIAGLNRC GKSCRLRWLN 60 YLRPNIKRGN IADDEEDLIL RLHKLLGNRW SLIAGRLPGR TDSEIKNYWN SHLSKKMNQK 120 VKTSLASTAQ ETMTTITATA PSQKTSDSSA DTTTTPSQKA SDDSADTNFD VNEFFDFSAE 180 GSYGLEWVNK FLELDEDTMA AQEKVIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-52 | MYB family protein |