PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033882.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 460aa    MW: 50851.6 Da    PI: 5.0606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033882.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3567.4e-18114201497
                  E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  v ++ ++++sg+l+lp +f++   +kk  s +++l+ ++gr+W+v l  r   g+ ++++GW + v +n+L+ gD++vF   ++s+ ++++ vf
  PCP033882.1 114 VVMRLSYTNSGLLWLPSEFCKLRPIKK--SCEVILQVSDGRTWTVDL--RYEEGKATFRRGWMDIVCDNNLELGDVCVFV--STSNVKPLFDVF 201
                  4568899999**********6667775..558***************..77777789**********************9..557777887775 PP
2B3474.7e-15331421195
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                  f+ +++ps+ ++   l lp +f + h +kk +  +++l+ ++  +W v l+y   +++  +++GW e v++n L++gD++vF  ++ +++++++ 
  PCP033882.1 331 FVVAMSPSYISSYF-LFLPSDFHKVHHIKKSC--EVILRVSNVGTWPVDLNYFSEGKKAKFGRGWMEVVRDNSLESGDVCVFVSIN-NSAKPLFD 421
                  66677777777776.********999988655..8*****************88888899**********************9776.55556665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MPKMELTSHD ESRDNSANDS NDDYGDDLSY KSGDGSGDNS AMILDKFLPC PRKTREKSTL  60
PSPQPHKKRI TSSSGKCDFP AEKYGVTSSS TPSGEVVALR RAIAFKSQNP SFIVVMRLSY  120
TNSGLLWLPS EFCKLRPIKK SCEVILQVSD GRTWTVDLRY EEGKATFRRG WMDIVCDNNL  180
ELGDVCVFVS TSNVKPLFDV FIFRSKEAAS CSIDEGKTVP KMEESDQADG DSVQILDDDS  240
TDDSSDEFSE DSDNNSSNGS SDDSCDNSVV IFDKFPSHQR KTSKKSSLPY PQPQKKSRTT  300
TSGKYDVPTE SGGSIALQRA TAFKSQNPTS FVVAMSPSYI SSYFLFLPSD FHKVHHIKKS  360
CEVILRVSNV GTWPVDLNYF SEGKKAKFGR GWMEVVRDNS LESGDVCVFV SINNSAKPLF  420
DVVFFRSGQA AKRTNIDGEK TVPAEMEENV DAAADSVQNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157PRKTREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-13B3 family protein