PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033879.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 273aa    MW: 31415.5 Da    PI: 8.7002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033879.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.62e-17170256394
                  EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  kv ++  +l ++ l+lp +f+++h + + +   ++l+ + gr+W+vk+ +y+ ++  + l +GWk+Fv++n L  gD +vF+++++  +++++
  PCP033879.1 170 KVAMTRTYLYRCYLSLPSQFIKKHLNRTVG--YVILRVLGGRTWRVKFeQYDTGR--CRLLGGWKKFVRENSLAIGDECVFTVINT--TKPLF 256
                  6778899999**************666556..69**************3334444..55778********************8764..44444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MSNPVFFKVP SGLEWKIELR KWDGEVWFEN GWQDFSSFYS LDYGHLLVFG YEGNSKFRVR  60
ILERSCTEID YPLQNTAEKA DEDEKSSDDS HDTSYHESGD YSDVGSVEIG ENHTPCTRKT  120
REKSLLSCPR PRKKNRPSSR GKANVPAASA NATALERASG FKSDRHPPLK VAMTRTYLYR  180
CYLSLPSQFI KKHLNRTVGY VILRVLGGRT WRVKFEQYDT GRCRLLGGWK KFVRENSLAI  240
GDECVFTVIN TTKPLFDVVI SRQRIECCDL QLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.14e-17B3 family protein