PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP033683.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 210aa MW: 23324.6 Da PI: 9.6293 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.2 | 6.9e-06 | 22 | 44 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PCP033683.1 22 FVCEICSKGFQRDQNLQLHRRGH 44 89*******************88 PP | |||||||
2 | zf-C2H2 | 17.4 | 1.2e-05 | 98 | 120 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s+ k H++t+ PCP033683.1 98 WQCERCSKKYAVQSDWKAHMKTC 120 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MPDPEADVIA LSPTTLLATN RFVCEICSKG FQRDQNLQLH RRGHNLPWKL KQRTSKEVRK 60 RVYVCPETSC VHHNPTRALG DLTGIKKHFC RKHGEKKWQC ERCSKKYAVQ SDWKAHMKTC 120 GTREYKCDCG TLFSRRDSFI THRAFCDALA EESAKAQTLM VGSDGSTNPS SNPTPSAKSA 180 VVASPPPPPH TPSNTVVSPA LSIQSSGNTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-107 | C2H2 family protein |