PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP033318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 145aa MW: 16443.1 Da PI: 10.0758 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 41.2 | 5.6e-13 | 11 | 95 | 1 | 85 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85 +fYn YA ++GF +rk++skk + ++ ++++fvC k+ k+ + + + + +a r +C+ak+ + k + ++k++v ++++ PCP033318.1 11 DFYNGYAITIGFGIRKHSSKKGSGDEGLVMKEFVCCKQRKKVDVNLN-PIGKGDKADARSDCRAKVAMLKPNgHNKFVVPVFKEQN 95 6*********************99999**************999988.889999************98888768888888777664 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MEFDSLGEDY DFYNGYAITI GFGIRKHSSK KGSGDEGLVM KEFVCCKQRK KVDVNLNPIG 60 KGDKADARSD CRAKVAMLKP NGHNKFVVPV FKEQNYHVAS GGIRNSSCIP KDMYNVEWNL 120 MSMMQKCLTS ILRMRKRKPS HSISR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-09 | FAR1 family protein |