PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033244.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 299aa    MW: 33350.6 Da    PI: 6.3136
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033244.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.91.1e-35261162101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+++g+sfvv++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF ++sF++g k+ll++i+
   PCP033244.1  26 FLTKTYQLVDDPSIDDVISWNDDGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFLNDSFRRGGKRLLCEIQ 113
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
   PCP033244.1 114 RRK 116
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MAPTPVEPTG ESTSGESSQR ALPTPFLTKT YQLVDDPSID DVISWNDDGS SFVVWNPTVF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFLNDS FRRGGKRLLC EIQRRKINPP  120
APPVASVWAV PTAKPMISPS NSGDEQVMSS SSSPIRASSE IMDENERLRK ENVQLTKELA  180
EVKSLCNNIF TMVSNYACAQ SENGFPELKP LDLMPGKRFS GKRKNEEEEE ASPKLFGVVI  240
GAKRAREAGG DGVENDETDL RLQRPSGSEV KSEPSDIGHK ETPWLKQCHM AKGVQLISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-86HSF family protein